scons: Reading SConscript files ... Using hostconfig settings from python/hostconfig/machines/dizzy.py Running infrastructure tests... scons: done reading SConscript files. scons: Building targets ... Install file: "mesh/build/debug_hostconfig,boost=1-65/libmesh.so" as "lib/libmesh.so" Install file: "linalg/build/debug_hostconfig,boost=1-65/liblinalg.so" as "lib/liblinalg.so" Generating global/build/debug_hostconfig,boost=1-65/src/Version.cpp from build information. scons: `test_exes' is up to date. /home/bob/petsc-3.1-p8/linux-gnu/bin/mpicxx -o global/build/debug_hostconfig,boost=1-65/src/Version.os -c -isystem /home/bob/petsc-3.1-p8/linux-gnu/include -isystem /home/bob/petsc-3.1-p8/include -isystem /home/robert/boost_1_65/include/ -isystem /usr/include/vtk-5.8 -Wall -Werror -Wnon-virtual-dtor -Woverloaded-virtual -Wextra -Wno-unused-parameter -Wvla -g -std=c++11 -Wno-deprecated-declarations -fPIC -DCHASTE_SUNDIALS_VERSION=20500 -DCHASTE_VTK -DCHASTE_CVODE -DCHASTE_XERCES -DTRILIBRARY -DTETLIBRARY -DANSI_DECLARATORS -Iglobal/build/debug_hostconfig,boost=1-65/src -Iglobal/src -Iglobal/build/debug_hostconfig,boost=1-65/src/checkpointing -Iglobal/src/checkpointing -Iglobal/build/debug_hostconfig,boost=1-65/src/fortests -Iglobal/src/fortests -Iglobal/build/debug_hostconfig,boost=1-65/src/random -Iglobal/src/random -Iglobal/build/debug_hostconfig,boost=1-65/src/parallel -Iglobal/src/parallel -Iglobal/build/debug_hostconfig,boost=1-65/src/timing -Iglobal/src/timing -Iglobal/build/debug_hostconfig,boost=1-65/test -Iglobal/test -I. -Icxxtest global/build/debug_hostconfig,boost=1-65/src/Version.cpp /home/bob/petsc-3.1-p8/linux-gnu/bin/mpicxx -o global/build/debug_hostconfig,boost=1-65/libglobal.so -shared global/build/debug_hostconfig,boost=1-65/src/ExecutableSupport.os global/build/debug_hostconfig,boost=1-65/src/Debug.os global/build/debug_hostconfig,boost=1-65/src/TimeStepper.os global/build/debug_hostconfig,boost=1-65/src/OutputDirectoryFifoQueue.os global/build/debug_hostconfig,boost=1-65/src/Exception.os global/build/debug_hostconfig,boost=1-65/src/ProgressReporter.os global/build/debug_hostconfig,boost=1-65/src/GetCurrentWorkingDirectory.os global/build/debug_hostconfig,boost=1-65/src/PosixPathFixer.os global/build/debug_hostconfig,boost=1-65/src/CommandLineArguments.os global/build/debug_hostconfig,boost=1-65/src/Citations.os global/build/debug_hostconfig,boost=1-65/src/FileFinder.os global/build/debug_hostconfig,boost=1-65/src/MathsCustomFunctions.os global/build/debug_hostconfig,boost=1-65/src/LogFile.os global/build/debug_hostconfig,boost=1-65/src/RandomNumberGenerator.os global/build/debug_hostconfig,boost=1-65/src/Warnings.os global/build/debug_hostconfig,boost=1-65/src/OutputFileHandler.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/Identifiable.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ArchiveOpener.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ProcessSpecificArchive.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ArchiveLocationInfo.os global/build/debug_hostconfig,boost=1-65/src/fortests/PetscSetupUtils.os global/build/debug_hostconfig,boost=1-65/src/fortests/CommandLineArgumentsMocker.os global/build/debug_hostconfig,boost=1-65/src/parallel/PetscException.os global/build/debug_hostconfig,boost=1-65/src/parallel/ReplicatableVector.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVectorException.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVectorFactory.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVector.os global/build/debug_hostconfig,boost=1-65/src/parallel/PetscTools.os global/build/debug_hostconfig,boost=1-65/src/timing/HeartEventHandler.os global/build/debug_hostconfig,boost=1-65/src/timing/MechanicsEventHandler.os global/build/debug_hostconfig,boost=1-65/src/timing/Timer.os global/build/debug_hostconfig,boost=1-65/src/timing/CellBasedEventHandler.os global/build/debug_hostconfig,boost=1-65/src/Version.os global/build/debug_hostconfig,boost=1-65/src/ChasteBuildRoot.os Install file: "global/build/debug_hostconfig,boost=1-65/libglobal.so" as "lib/libglobal.so" nm -g lib/libglobal.so | cut -c 12- | sort > global/build/debug_hostconfig,boost=1-65/global.if Copy("linklib/libglobal.so", "/home/garmir/workspace/Chaste/lib/libglobal.so") Copy("linklib/liblinalg.so", "/home/garmir/workspace/Chaste/lib/liblinalg.so") Copy("linklib/libmesh.so", "/home/garmir/workspace/Chaste/lib/libmesh.so") scons: `mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner' is up to date. Running 'mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner' Running 22 tests ***** TestNodesOnlyMesh.hpp ***** Entering TestConstructNodesWithoutMesh Passed Entering TestConstructNodesWithoutMeshSharedPtr Passed Entering TestCalculateBoundingBox Passed Entering TestSetInitialBoxCollection Passed Entering TestConstuctingAndEnlargingInitialBoxCollection Passed Entering TestBoxCollectionSizeAndSwelling Passed Entering TestMovingNodesInBoxCollection Passed Entering TestClearingNodesOnlyMesh Passed Entering TestConstructNodesWithoutMeshUsingMesh Passed Entering TestGetNextAvailableIndex Passed Entering TestWriteNodesWithoutMeshUsingVtk Passed Entering TestWriteNodesWithoutMesh Passed Entering TestGetSetRadiusMethods Passed Entering TestAddNode Passed Entering TestDeleteNodesAndRemesh Passed Entering TestCleanDeleteAndAddNode Passed Entering TestHaloNodes Passed Entering TestGetNodesOutsideLocalDomain Passed Entering TestAddAndGetHaloNodes Passed Entering TestArchiving Passed Entering TestArchiveNodesOnlyMeshWithNodeAttributes Passed Entering TestLoadBalanceMesh Passed Summary of Memory Usage in PETSc [0]Current space PetscMalloc()ed 17696, max space PetscMalloced() 17696 [0]Current process memory 2.14077e+08 max process memory 2.14077e+08 OK! ==20488== Memcheck, a memory error detector ==20488== Copyright (C) 2002-2013, and GNU GPL'd, by Julian Seward et al. ==20488== Using Valgrind-3.10.1 and LibVEX; rerun with -h for copyright info ==20488== Command: mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner -malloc_debug -malloc_dump -memory_info ==20488== Parent PID: 20487 ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55025: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55036: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E5501B: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55059: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E550D0: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55091: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc190 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B50: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc188 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B6E: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B72: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B83: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B8D: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646D60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc188 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F67: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F7B: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F7F: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid write of size 8 ==20488== at 0x9646F89: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9647055: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x96470E2: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 4 ==20488== at 0x96470E6: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc170 is 0 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid free() / delete / delete[] / realloc() ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E550BB: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474F02: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bdc170 is 0 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55512: std::_Rb_tree, boost::serialization::typeid_system::type_compare, std::allocator >::_M_erase(std::_Rb_tree_node*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x7E55566: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55025: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E5501B: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55059: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E550D0: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x7E55091: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B50: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B6E: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646B87: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646D60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9646F67: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9647028: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x96470D5: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x9647055: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 8 ==20488== at 0x96470E2: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid read of size 4 ==20488== at 0x96470E6: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19) ==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1720 is 0 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== Invalid free() / delete / delete[] / realloc() ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E550BB: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x47559A: boost::serialization::extended_type_info_typeid >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96) ==20488== by 0x474D92: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== Address 0x17bd1720 is 0 bytes inside a block of size 40 free'd ==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so) ==20488== by 0x7E55572: boost::serialization::singleton > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56) ==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0) ==20488== by 0x40108D9: _dl_fini (dl-fini.c:252) ==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82) ==20488== by 0x9E2E1F4: exit (exit.c:104) ==20488== by 0x9E13F4B: (below main) (libc-start.c:321) ==20488== ==20488== ==20488== FILE DESCRIPTORS: 9 open at exit. ==20488== Open file descriptor 10: ==20488== at 0x9EE1B77: pipe (syscall-template.S:81) ==20488== by 0x18FABC29: ??? ==20488== by 0x18FAB7CB: ??? ==20488== by 0xEE83292: orte_init (orte_init.c:131) ==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344) ==20488== by 0xA22271E: PMPI_Init (pinit.c:80) ==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561) ==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19) ==20488== ==20488== Open file descriptor 7: ==20488== at 0x9EE1B77: pipe (syscall-template.S:81) ==20488== by 0x18FABBF6: ??? ==20488== by 0x18FAB7CB: ??? ==20488== by 0xEE83292: orte_init (orte_init.c:131) ==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344) ==20488== by 0xA22271E: PMPI_Init (pinit.c:80) ==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561) ==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19) ==20488== ==20488== Open AF_UNIX socket 6: ==20488== at 0x9EF126A: socketpair (syscall-template.S:81) ==20488== by 0xF0F20B0: opal_evutil_socketpair (evutil.c:59) ==20488== by 0xF0F2181: opal_evsignal_init (signal.c:104) ==20488== by 0xF0F284E: poll_init (poll.c:109) ==20488== by 0xF0F008F: opal_event_base_new (event.c:366) ==20488== by 0xF0EFEB2: opal_event_init (event.c:329) ==20488== by 0xF0E2566: opal_init (opal_init.c:365) ==20488== by 0xEE8310B: orte_init (orte_init.c:76) ==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344) ==20488== by 0xA22271E: PMPI_Init (pinit.c:80) ==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561) ==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19) ==20488== ==20488== Open AF_UNIX socket 5: ==20488== at 0x9EF126A: socketpair (syscall-template.S:81) ==20488== by 0xF0F20B0: opal_evutil_socketpair (evutil.c:59) ==20488== by 0xF0F2181: opal_evsignal_init (signal.c:104) ==20488== by 0xF0F284E: poll_init (poll.c:109) ==20488== by 0xF0F008F: opal_event_base_new (event.c:366) ==20488== by 0xF0EFEB2: opal_event_init (event.c:329) ==20488== by 0xF0E2566: opal_init (opal_init.c:365) ==20488== by 0xEE8310B: orte_init (orte_init.c:76) ==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344) ==20488== by 0xA22271E: PMPI_Init (pinit.c:80) ==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561) ==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19) ==20488== ==20488== Open file descriptor 4: /home/garmir/workspace/Chaste/test_summary/TestNodesOnlyMeshRunner ==20488== ==20488== ==20488== Open file descriptor 3: /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMesh.log ==20488== ==20488== ==20488== Open file descriptor 2: ==20488== ==20488== ==20488== Open file descriptor 1: ==20488== ==20488== ==20488== Open file descriptor 0: /dev/pts/30 ==20488== ==20488== ==20488== ==20488== HEAP SUMMARY: ==20488== in use at exit: 187,284 bytes in 2,585 blocks ==20488== total heap usage: 148,808 allocs, 146,225 frees, 26,151,638 bytes allocated ==20488== ==20488== LEAK SUMMARY: ==20488== definitely lost: 0 bytes in 0 blocks ==20488== indirectly lost: 0 bytes in 0 blocks ==20488== possibly lost: 0 bytes in 0 blocks ==20488== still reachable: 120 bytes in 3 blocks ==20488== suppressed: 187,164 bytes in 2,582 blocks ==20488== Reachable blocks (those to which a pointer was found) are not shown. ==20488== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==20488== ==20488== For counts of detected and suppressed errors, rerun with: -v ==20488== ERROR SUMMARY: 41 errors from 38 contexts (suppressed: 51 from 51) python python/DisplayTests.py test_summary/lofty.cs.ox.ac.uk.MemoryTesting_hostconfig,boost=1-65 MemoryTesting_hostconfig,boost=1-65 Test summary generated in file:///home/garmir/workspace/Chaste/test_summary/lofty.cs.ox.ac.uk.MemoryTesting_hostconfig,boost=1-65/index.html Overall test status: Failed 1 out of 5 test suites (mesh) Test output written to: /home/garmir/testoutput scons: done building targets.