id,summary,reporter,owner,description,type,status,milestone,component,version,severity,resolution,keywords,cc
11439,Duplicate name of actual target: <pstage/lib>libboost_system.a,munholl@…,,"Hello,

I am trying to compile boost1.53, I can't use a version newer than 1.55 as this is for the Cufflinks RNA tools.  I already had this version installed and working previously, but an HDD made me have to reinstall everything. The commands I have used (multiple times) before are:

./bootstrap.sh

which gives:

Building Boost.Build engine with toolset gcc... tools/build/v2/engine/bin.linuxx86_64/b2
Detecting Python version... 2.7
Detecting Python root... /usr
Unicode/ICU support for Boost.Regex?... not found.
Generating Boost.Build configuration in project-config.jam...

Bootstrapping is done. To build, run:

    ./b2
    
To adjust configuration, edit 'project-config.jam'.
Further information:

   - Command line help:
     ./b2 --help
     
   - Getting started guide: 
     http://www.boost.org/more/getting_started/unix-variants.html
     
   - Boost.Build documentation:
     http://www.boost.org/boost-build2/doc/html/index.html

Then I run:

./bjam link=static runtime-link=static stage install I get the following

Which is now giving me:

Performing configuration checks

    - 32-bit                   : no
    - 64-bit                   : yes
    - x86                      : yes
    - has_icu builds           : yes
warning: Graph library does not contain MPI-based parallel components.
note: to enable them, add ""using mpi ;"" to your user-config.jam
    - iconv (libc)             : yes
    - icu                      : yes
    - gcc visibility           : yes
    - long double support      : yes
warning: skipping optional Message Passing Interface (MPI) library.
note: to enable MPI support, add ""using mpi ;"" to user-config.jam.
note: to suppress this message, pass ""--without-mpi"" to bjam.
note: otherwise, you can safely ignore this message.
/genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:1079: in virtual-target.register-actual-name from module virtual-target
error: Duplicate name of actual target: <pstage/lib>libboost_system.a
error: previous virtual target { common%common.copy-libboost_system.a.STATIC_LIB { gcc%gcc.archive-libboost_system.a.STATIC_LIB { gcc%gcc.compile.c++-error_code.o.OBJ { error_code.cpp.CPP } } } }
error: created from ./stage-proper
error: another virtual target { common%common.copy-libboost_system.a.STATIC_LIB { gcc%gcc.archive-libboost_system.a.STATIC_LIB { gcc%gcc.compile.c++-error_code.o.OBJ { error_code.cpp.CPP } } } }
error: created from ./stage-proper
error: added properties: <runtime-link>shared <warnings>on
error: removed properties: <runtime-link>static <warnings>all
/genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:490: in actualize-no-scanner from module object(file-target)@3722
/genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:135: in object(file-target)@3722.actualize from module object(file-target)@3722
/genome/Apps/boost_1_53_0/tools/build/v2/build-system.jam:749: in load from module build-system
/genome/Apps/boost_1_53_0/tools/build/v2/kernel/modules.jam:283: in import from module modules
/genome/Apps/boost_1_53_0/tools/build/v2/kernel/bootstrap.jam:142: in boost-build from module
/genome/Apps/boost_1_53_0/boost-build.jam:17: in module scope from module

Whereas before it compiled without issue.  I need the runtime-links to be static, when I try to make the cufflinks files I get a bunch of errors from hpp files in /usr/local/boost/* folders otherwise.",Support Requests,new,To Be Determined,Building Boost,Boost 1.53.0,Showstopper,,,