Ticket #13186: memory_output.txt

File memory_output.txt, 91.2 KB (added by gary.mirams@…, 5 years ago)

full valgrind output (ignore PETSc stuff - that always happens!)

Line 
1scons: Reading SConscript files ...
2Using hostconfig settings from python/hostconfig/machines/dizzy.py
3Running infrastructure tests...
4scons: done reading SConscript files.
5scons: Building targets ...
6Install file: "mesh/build/debug_hostconfig,boost=1-65/libmesh.so" as "lib/libmesh.so"
7Install file: "linalg/build/debug_hostconfig,boost=1-65/liblinalg.so" as "lib/liblinalg.so"
8Generating global/build/debug_hostconfig,boost=1-65/src/Version.cpp from build information.
9scons: `test_exes' is up to date.
10/home/bob/petsc-3.1-p8/linux-gnu/bin/mpicxx -o global/build/debug_hostconfig,boost=1-65/src/Version.os -c -isystem /home/bob/petsc-3.1-p8/linux-gnu/include -isystem /home/bob/petsc-3.1-p8/include -isystem /home/robert/boost_1_65/include/ -isystem /usr/include/vtk-5.8 -Wall -Werror -Wnon-virtual-dtor -Woverloaded-virtual -Wextra -Wno-unused-parameter -Wvla -g -std=c++11 -Wno-deprecated-declarations -fPIC -DCHASTE_SUNDIALS_VERSION=20500 -DCHASTE_VTK -DCHASTE_CVODE -DCHASTE_XERCES -DTRILIBRARY -DTETLIBRARY -DANSI_DECLARATORS -Iglobal/build/debug_hostconfig,boost=1-65/src -Iglobal/src -Iglobal/build/debug_hostconfig,boost=1-65/src/checkpointing -Iglobal/src/checkpointing -Iglobal/build/debug_hostconfig,boost=1-65/src/fortests -Iglobal/src/fortests -Iglobal/build/debug_hostconfig,boost=1-65/src/random -Iglobal/src/random -Iglobal/build/debug_hostconfig,boost=1-65/src/parallel -Iglobal/src/parallel -Iglobal/build/debug_hostconfig,boost=1-65/src/timing -Iglobal/src/timing -Iglobal/build/debug_hostconfig,boost=1-65/test -Iglobal/test -I. -Icxxtest global/build/debug_hostconfig,boost=1-65/src/Version.cpp
11/home/bob/petsc-3.1-p8/linux-gnu/bin/mpicxx -o global/build/debug_hostconfig,boost=1-65/libglobal.so -shared global/build/debug_hostconfig,boost=1-65/src/ExecutableSupport.os global/build/debug_hostconfig,boost=1-65/src/Debug.os global/build/debug_hostconfig,boost=1-65/src/TimeStepper.os global/build/debug_hostconfig,boost=1-65/src/OutputDirectoryFifoQueue.os global/build/debug_hostconfig,boost=1-65/src/Exception.os global/build/debug_hostconfig,boost=1-65/src/ProgressReporter.os global/build/debug_hostconfig,boost=1-65/src/GetCurrentWorkingDirectory.os global/build/debug_hostconfig,boost=1-65/src/PosixPathFixer.os global/build/debug_hostconfig,boost=1-65/src/CommandLineArguments.os global/build/debug_hostconfig,boost=1-65/src/Citations.os global/build/debug_hostconfig,boost=1-65/src/FileFinder.os global/build/debug_hostconfig,boost=1-65/src/MathsCustomFunctions.os global/build/debug_hostconfig,boost=1-65/src/LogFile.os global/build/debug_hostconfig,boost=1-65/src/RandomNumberGenerator.os global/build/debug_hostconfig,boost=1-65/src/Warnings.os global/build/debug_hostconfig,boost=1-65/src/OutputFileHandler.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/Identifiable.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ArchiveOpener.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ProcessSpecificArchive.os global/build/debug_hostconfig,boost=1-65/src/checkpointing/ArchiveLocationInfo.os global/build/debug_hostconfig,boost=1-65/src/fortests/PetscSetupUtils.os global/build/debug_hostconfig,boost=1-65/src/fortests/CommandLineArgumentsMocker.os global/build/debug_hostconfig,boost=1-65/src/parallel/PetscException.os global/build/debug_hostconfig,boost=1-65/src/parallel/ReplicatableVector.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVectorException.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVectorFactory.os global/build/debug_hostconfig,boost=1-65/src/parallel/DistributedVector.os global/build/debug_hostconfig,boost=1-65/src/parallel/PetscTools.os global/build/debug_hostconfig,boost=1-65/src/timing/HeartEventHandler.os global/build/debug_hostconfig,boost=1-65/src/timing/MechanicsEventHandler.os global/build/debug_hostconfig,boost=1-65/src/timing/Timer.os global/build/debug_hostconfig,boost=1-65/src/timing/CellBasedEventHandler.os global/build/debug_hostconfig,boost=1-65/src/Version.os global/build/debug_hostconfig,boost=1-65/src/ChasteBuildRoot.os
12Install file: "global/build/debug_hostconfig,boost=1-65/libglobal.so" as "lib/libglobal.so"
13nm -g lib/libglobal.so | cut -c 12- | sort > global/build/debug_hostconfig,boost=1-65/global.if
14Copy("linklib/libglobal.so", "/home/garmir/workspace/Chaste/lib/libglobal.so")
15Copy("linklib/liblinalg.so", "/home/garmir/workspace/Chaste/lib/liblinalg.so")
16Copy("linklib/libmesh.so", "/home/garmir/workspace/Chaste/lib/libmesh.so")
17scons: `mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner' is up to date.
18Running 'mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner'
19Running 22 tests
20
21 ***** TestNodesOnlyMesh.hpp *****
22
23
24Entering TestConstructNodesWithoutMesh
25Passed
26Entering TestConstructNodesWithoutMeshSharedPtr
27Passed
28Entering TestCalculateBoundingBox
29Passed
30Entering TestSetInitialBoxCollection
31Passed
32Entering TestConstuctingAndEnlargingInitialBoxCollection
33Passed
34Entering TestBoxCollectionSizeAndSwelling
35Passed
36Entering TestMovingNodesInBoxCollection
37Passed
38Entering TestClearingNodesOnlyMesh
39Passed
40Entering TestConstructNodesWithoutMeshUsingMesh
41Passed
42Entering TestGetNextAvailableIndex
43Passed
44Entering TestWriteNodesWithoutMeshUsingVtk
45Passed
46Entering TestWriteNodesWithoutMesh
47Passed
48Entering TestGetSetRadiusMethods
49Passed
50Entering TestAddNode
51Passed
52Entering TestDeleteNodesAndRemesh
53Passed
54Entering TestCleanDeleteAndAddNode
55Passed
56Entering TestHaloNodes
57Passed
58Entering TestGetNodesOutsideLocalDomain
59Passed
60Entering TestAddAndGetHaloNodes
61Passed
62Entering TestArchiving
63Passed
64Entering TestArchiveNodesOnlyMeshWithNodeAttributes
65Passed
66Entering TestLoadBalanceMesh
67Passed
68Summary of Memory Usage in PETSc
69[0]Current space PetscMalloc()ed 17696, max space PetscMalloced() 17696
70[0]Current process memory 2.14077e+08 max process memory 2.14077e+08
71OK!
72==20488== Memcheck, a memory error detector
73==20488== Copyright (C) 2002-2013, and GNU GPL'd, by Julian Seward et al.
74==20488== Using Valgrind-3.10.1 and LibVEX; rerun with -h for copyright info
75==20488== Command: mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner -malloc_debug -malloc_dump -memory_info
76==20488== Parent PID: 20487
77==20488==
78==20488== Invalid read of size 8
79==20488== at 0x7E55025: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
80==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
81==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
82==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
83==20488== by 0x9E2E1F4: exit (exit.c:104)
84==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
85==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd
86==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
87==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
88==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
89==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
90==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
91==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
92==20488== by 0x9E2E1F4: exit (exit.c:104)
93==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
94==20488==
95==20488== Invalid read of size 8
96==20488== at 0x7E55036: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
97==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
98==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
99==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
100==20488== by 0x9E2E1F4: exit (exit.c:104)
101==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
102==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
103==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
104==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
105==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
106==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
107==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
108==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
109==20488== by 0x9E2E1F4: exit (exit.c:104)
110==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
111==20488==
112==20488== Invalid read of size 8
113==20488== at 0x7E5501B: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
114==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
115==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
116==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
117==20488== by 0x9E2E1F4: exit (exit.c:104)
118==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
119==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd
120==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
121==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
122==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
123==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
124==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
125==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
126==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
127==20488== by 0x9E2E1F4: exit (exit.c:104)
128==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
129==20488==
130==20488== Invalid read of size 8
131==20488== at 0x7E55059: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
132==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
133==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
134==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
135==20488== by 0x9E2E1F4: exit (exit.c:104)
136==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
137==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd
138==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
139==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
140==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
141==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
142==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
143==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
144==20488== by 0x9E2E1F4: exit (exit.c:104)
145==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
146==20488==
147==20488== Invalid read of size 8
148==20488== at 0x7E550D0: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
149==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
150==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
151==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
152==20488== by 0x9E2E1F4: exit (exit.c:104)
153==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
154==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
155==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
156==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
157==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
158==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
159==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
160==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
161==20488== by 0x9E2E1F4: exit (exit.c:104)
162==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
163==20488==
164==20488== Invalid read of size 8
165==20488== at 0x7E55091: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
166==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
167==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
168==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
169==20488== by 0x9E2E1F4: exit (exit.c:104)
170==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
171==20488== Address 0x17bdc190 is 32 bytes inside a block of size 40 free'd
172==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
173==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
174==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
175==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
176==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
177==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
178==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
179==20488== by 0x9E2E1F4: exit (exit.c:104)
180==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
181==20488==
182==20488== Invalid read of size 8
183==20488== at 0x9646B50: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
184==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
185==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
186==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
187==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
188==20488== by 0x9E2E1F4: exit (exit.c:104)
189==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
190==20488== Address 0x17bdc188 is 24 bytes inside a block of size 40 free'd
191==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
192==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
193==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
194==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
195==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
196==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
197==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
198==20488== by 0x9E2E1F4: exit (exit.c:104)
199==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
200==20488==
201==20488== Invalid read of size 8
202==20488== at 0x9646B6E: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
203==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
204==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
205==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
206==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
207==20488== by 0x9E2E1F4: exit (exit.c:104)
208==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
209==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd
210==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
211==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
212==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
213==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
214==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
215==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
216==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
217==20488== by 0x9E2E1F4: exit (exit.c:104)
218==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
219==20488==
220==20488== Invalid read of size 8
221==20488== at 0x9646B72: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
222==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
223==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
224==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
225==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
226==20488== by 0x9E2E1F4: exit (exit.c:104)
227==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
228==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
229==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
230==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
231==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
232==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
233==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
234==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
235==20488== by 0x9E2E1F4: exit (exit.c:104)
236==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
237==20488==
238==20488== Invalid read of size 8
239==20488== at 0x9646B83: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
240==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
241==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
242==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
243==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
244==20488== by 0x9E2E1F4: exit (exit.c:104)
245==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
246==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd
247==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
248==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
249==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
250==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
251==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
252==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
253==20488== by 0x9E2E1F4: exit (exit.c:104)
254==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
255==20488==
256==20488== Invalid read of size 8
257==20488== at 0x9646B8D: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
258==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
259==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
260==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
261==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
262==20488== by 0x9E2E1F4: exit (exit.c:104)
263==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
264==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
265==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
266==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
267==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
268==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
269==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
270==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
271==20488== by 0x9E2E1F4: exit (exit.c:104)
272==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
273==20488==
274==20488== Invalid read of size 8
275==20488== at 0x9646D60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
276==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
277==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
278==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
279==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
280==20488== by 0x9E2E1F4: exit (exit.c:104)
281==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
282==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd
283==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
284==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
285==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
286==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
287==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
288==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
289==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
290==20488== by 0x9E2E1F4: exit (exit.c:104)
291==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
292==20488==
293==20488== Invalid read of size 8
294==20488== at 0x9646F60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
295==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
296==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
297==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
298==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
299==20488== by 0x9E2E1F4: exit (exit.c:104)
300==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
301==20488== Address 0x17bdc188 is 24 bytes inside a block of size 40 free'd
302==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
303==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
304==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
305==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
306==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
307==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
308==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
309==20488== by 0x9E2E1F4: exit (exit.c:104)
310==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
311==20488==
312==20488== Invalid read of size 8
313==20488== at 0x9646F67: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
314==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
315==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
316==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
317==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
318==20488== by 0x9E2E1F4: exit (exit.c:104)
319==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
320==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd
321==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
322==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
323==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
324==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
325==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
326==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
327==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
328==20488== by 0x9E2E1F4: exit (exit.c:104)
329==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
330==20488==
331==20488== Invalid read of size 8
332==20488== at 0x9646F7B: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
333==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
334==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
335==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
336==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
337==20488== by 0x9E2E1F4: exit (exit.c:104)
338==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
339==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd
340==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
341==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
342==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
343==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
344==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
345==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
346==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
347==20488== by 0x9E2E1F4: exit (exit.c:104)
348==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
349==20488==
350==20488== Invalid read of size 8
351==20488== at 0x9646F7F: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
352==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
353==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
354==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
355==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
356==20488== by 0x9E2E1F4: exit (exit.c:104)
357==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
358==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd
359==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
360==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
361==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
362==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
363==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
364==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
365==20488== by 0x9E2E1F4: exit (exit.c:104)
366==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
367==20488==
368==20488== Invalid write of size 8
369==20488== at 0x9646F89: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
370==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
371==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
372==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
373==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
374==20488== by 0x9E2E1F4: exit (exit.c:104)
375==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
376==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
377==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
378==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
379==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
380==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
381==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
382==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
383==20488== by 0x9E2E1F4: exit (exit.c:104)
384==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
385==20488==
386==20488== Invalid read of size 8
387==20488== at 0x9647055: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
388==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
389==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
390==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
391==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
392==20488== by 0x9E2E1F4: exit (exit.c:104)
393==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
394==20488== Address 0x17bdc180 is 16 bytes inside a block of size 40 free'd
395==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
396==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
397==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
398==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
399==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
400==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
401==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
402==20488== by 0x9E2E1F4: exit (exit.c:104)
403==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
404==20488==
405==20488== Invalid read of size 8
406==20488== at 0x96470E2: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
407==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
408==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
409==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
410==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
411==20488== by 0x9E2E1F4: exit (exit.c:104)
412==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
413==20488== Address 0x17bdc178 is 8 bytes inside a block of size 40 free'd
414==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
415==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
416==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
417==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
418==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
419==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
420==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
421==20488== by 0x9E2E1F4: exit (exit.c:104)
422==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
423==20488==
424==20488== Invalid read of size 4
425==20488== at 0x96470E6: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
426==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
427==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
428==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
429==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
430==20488== by 0x9E2E1F4: exit (exit.c:104)
431==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
432==20488== Address 0x17bdc170 is 0 bytes inside a block of size 40 free'd
433==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
434==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
435==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
436==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
437==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
438==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
439==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
440==20488== by 0x9E2E1F4: exit (exit.c:104)
441==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
442==20488==
443==20488== Invalid free() / delete / delete[] / realloc()
444==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
445==20488== by 0x7E550BB: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
446==20488== by 0x4756E6: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
447==20488== by 0x474F02: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<3u, 3u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
448==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
449==20488== by 0x9E2E1F4: exit (exit.c:104)
450==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
451==20488== Address 0x17bdc170 is 0 bytes inside a block of size 40 free'd
452==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
453==20488== by 0x7E55512: std::_Rb_tree<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::extended_type_info_typeid_0 const*, std::_Identity<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> >::_M_erase(std::_Rb_tree_node<boost::serialization::typeid_system::extended_type_info_typeid_0 const*>*) (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
454==20488== by 0x7E55566: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
455==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
456==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
457==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
458==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
459==20488== by 0x9E2E1F4: exit (exit.c:104)
460==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
461==20488==
462==20488== Invalid read of size 8
463==20488== at 0x7E55025: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
464==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
465==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
466==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
467==20488== by 0x9E2E1F4: exit (exit.c:104)
468==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
469==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd
470==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
471==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
472==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
473==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
474==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
475==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
476==20488== by 0x9E2E1F4: exit (exit.c:104)
477==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
478==20488==
479==20488== Invalid read of size 8
480==20488== at 0x7E5501B: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
481==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
482==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
483==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
484==20488== by 0x9E2E1F4: exit (exit.c:104)
485==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
486==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd
487==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
488==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
489==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
490==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
491==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
492==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
493==20488== by 0x9E2E1F4: exit (exit.c:104)
494==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
495==20488==
496==20488== Invalid read of size 8
497==20488== at 0x7E55059: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
498==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
499==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
500==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
501==20488== by 0x9E2E1F4: exit (exit.c:104)
502==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
503==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd
504==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
505==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
506==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
507==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
508==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
509==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
510==20488== by 0x9E2E1F4: exit (exit.c:104)
511==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
512==20488==
513==20488== Invalid read of size 8
514==20488== at 0x7E550D0: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
515==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
516==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
517==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
518==20488== by 0x9E2E1F4: exit (exit.c:104)
519==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
520==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
521==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
522==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
523==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
524==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
525==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
526==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
527==20488== by 0x9E2E1F4: exit (exit.c:104)
528==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
529==20488==
530==20488== Invalid read of size 8
531==20488== at 0x7E55091: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
532==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
533==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
534==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
535==20488== by 0x9E2E1F4: exit (exit.c:104)
536==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
537==20488== Address 0x17bd1740 is 32 bytes inside a block of size 40 free'd
538==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
539==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
540==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
541==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
542==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
543==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
544==20488== by 0x9E2E1F4: exit (exit.c:104)
545==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
546==20488==
547==20488== Invalid read of size 8
548==20488== at 0x9646B50: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
549==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
550==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
551==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
552==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
553==20488== by 0x9E2E1F4: exit (exit.c:104)
554==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
555==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
556==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
557==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
558==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
559==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
560==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
561==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
562==20488== by 0x9E2E1F4: exit (exit.c:104)
563==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
564==20488==
565==20488== Invalid read of size 8
566==20488== at 0x9646B6E: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
567==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
568==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
569==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
570==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
571==20488== by 0x9E2E1F4: exit (exit.c:104)
572==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
573==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd
574==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
575==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
576==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
577==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
578==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
579==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
580==20488== by 0x9E2E1F4: exit (exit.c:104)
581==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
582==20488==
583==20488== Invalid read of size 8
584==20488== at 0x9646B87: std::_Rb_tree_increment(std::_Rb_tree_node_base const*) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
585==20488== by 0x7E5509E: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
586==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
587==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
588==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
589==20488== by 0x9E2E1F4: exit (exit.c:104)
590==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
591==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
592==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
593==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
594==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
595==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
596==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
597==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
598==20488== by 0x9E2E1F4: exit (exit.c:104)
599==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
600==20488==
601==20488== Invalid read of size 8
602==20488== at 0x9646D60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
603==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
604==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
605==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
606==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
607==20488== by 0x9E2E1F4: exit (exit.c:104)
608==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
609==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd
610==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
611==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
612==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
613==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
614==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
615==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
616==20488== by 0x9E2E1F4: exit (exit.c:104)
617==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
618==20488==
619==20488== Invalid read of size 8
620==20488== at 0x9646F60: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
621==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
622==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
623==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
624==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
625==20488== by 0x9E2E1F4: exit (exit.c:104)
626==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
627==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
628==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
629==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
630==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
631==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
632==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
633==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
634==20488== by 0x9E2E1F4: exit (exit.c:104)
635==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
636==20488==
637==20488== Invalid read of size 8
638==20488== at 0x9646F67: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
639==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
640==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
641==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
642==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
643==20488== by 0x9E2E1F4: exit (exit.c:104)
644==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
645==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd
646==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
647==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
648==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
649==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
650==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
651==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
652==20488== by 0x9E2E1F4: exit (exit.c:104)
653==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
654==20488==
655==20488== Invalid read of size 8
656==20488== at 0x9647028: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
657==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
658==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
659==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
660==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
661==20488== by 0x9E2E1F4: exit (exit.c:104)
662==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
663==20488== Address 0x17bd1738 is 24 bytes inside a block of size 40 free'd
664==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
665==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
666==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
667==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
668==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
669==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
670==20488== by 0x9E2E1F4: exit (exit.c:104)
671==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
672==20488==
673==20488== Invalid read of size 8
674==20488== at 0x96470D5: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
675==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
676==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
677==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
678==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
679==20488== by 0x9E2E1F4: exit (exit.c:104)
680==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
681==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd
682==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
683==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
684==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
685==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
686==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
687==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
688==20488== by 0x9E2E1F4: exit (exit.c:104)
689==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
690==20488==
691==20488== Invalid read of size 8
692==20488== at 0x9647055: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
693==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
694==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
695==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
696==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
697==20488== by 0x9E2E1F4: exit (exit.c:104)
698==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
699==20488== Address 0x17bd1730 is 16 bytes inside a block of size 40 free'd
700==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
701==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
702==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
703==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
704==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
705==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
706==20488== by 0x9E2E1F4: exit (exit.c:104)
707==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
708==20488==
709==20488== Invalid read of size 8
710==20488== at 0x96470E2: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
711==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
712==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
713==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
714==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
715==20488== by 0x9E2E1F4: exit (exit.c:104)
716==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
717==20488== Address 0x17bd1728 is 8 bytes inside a block of size 40 free'd
718==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
719==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
720==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
721==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
722==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
723==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
724==20488== by 0x9E2E1F4: exit (exit.c:104)
725==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
726==20488==
727==20488== Invalid read of size 4
728==20488== at 0x96470E6: std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&) (in /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.19)
729==20488== by 0x7E550B3: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
730==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
731==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
732==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
733==20488== by 0x9E2E1F4: exit (exit.c:104)
734==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
735==20488== Address 0x17bd1720 is 0 bytes inside a block of size 40 free'd
736==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
737==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
738==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
739==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
740==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
741==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
742==20488== by 0x9E2E1F4: exit (exit.c:104)
743==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
744==20488==
745==20488== Invalid free() / delete / delete[] / realloc()
746==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
747==20488== by 0x7E550BB: boost::serialization::typeid_system::extended_type_info_typeid_0::type_unregister() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
748==20488== by 0x47559A: boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> >::~extended_type_info_typeid() (extended_type_info_typeid.hpp:96)
749==20488== by 0x474D92: boost::serialization::singleton<boost::serialization::extended_type_info_typeid<AbstractTetrahedralMesh<2u, 2u> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMeshRunner)
750==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
751==20488== by 0x9E2E1F4: exit (exit.c:104)
752==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
753==20488== Address 0x17bd1720 is 0 bytes inside a block of size 40 free'd
754==20488== at 0x4C2C2BC: operator delete(void*) (in /usr/lib/valgrind/vgpreload_memcheck-amd64-linux.so)
755==20488== by 0x7E55572: boost::serialization::singleton<std::multiset<boost::serialization::typeid_system::extended_type_info_typeid_0 const*, boost::serialization::typeid_system::type_compare, std::allocator<boost::serialization::typeid_system::extended_type_info_typeid_0 const*> > >::get_instance()::singleton_wrapper::~singleton_wrapper() (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
756==20488== by 0x9E2E539: __cxa_finalize (cxa_finalize.c:56)
757==20488== by 0x7E4D402: ??? (in /home/robert/boost_1_65/lib/libboost_serialization.so.1.65.0)
758==20488== by 0x40108D9: _dl_fini (dl-fini.c:252)
759==20488== by 0x9E2E1A8: __run_exit_handlers (exit.c:82)
760==20488== by 0x9E2E1F4: exit (exit.c:104)
761==20488== by 0x9E13F4B: (below main) (libc-start.c:321)
762==20488==
763==20488==
764==20488== FILE DESCRIPTORS: 9 open at exit.
765==20488== Open file descriptor 10:
766==20488== at 0x9EE1B77: pipe (syscall-template.S:81)
767==20488== by 0x18FABC29: ???
768==20488== by 0x18FAB7CB: ???
769==20488== by 0xEE83292: orte_init (orte_init.c:131)
770==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344)
771==20488== by 0xA22271E: PMPI_Init (pinit.c:80)
772==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561)
773==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
774==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
775==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
776==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
777==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
778==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
779==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
780==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19)
781==20488==
782==20488== Open file descriptor 7:
783==20488== at 0x9EE1B77: pipe (syscall-template.S:81)
784==20488== by 0x18FABBF6: ???
785==20488== by 0x18FAB7CB: ???
786==20488== by 0xEE83292: orte_init (orte_init.c:131)
787==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344)
788==20488== by 0xA22271E: PMPI_Init (pinit.c:80)
789==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561)
790==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
791==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
792==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
793==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
794==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
795==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
796==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
797==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19)
798==20488==
799==20488== Open AF_UNIX socket 6: <unknown>
800==20488== at 0x9EF126A: socketpair (syscall-template.S:81)
801==20488== by 0xF0F20B0: opal_evutil_socketpair (evutil.c:59)
802==20488== by 0xF0F2181: opal_evsignal_init (signal.c:104)
803==20488== by 0xF0F284E: poll_init (poll.c:109)
804==20488== by 0xF0F008F: opal_event_base_new (event.c:366)
805==20488== by 0xF0EFEB2: opal_event_init (event.c:329)
806==20488== by 0xF0E2566: opal_init (opal_init.c:365)
807==20488== by 0xEE8310B: orte_init (orte_init.c:76)
808==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344)
809==20488== by 0xA22271E: PMPI_Init (pinit.c:80)
810==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561)
811==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
812==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
813==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
814==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
815==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
816==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
817==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
818==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19)
819==20488==
820==20488== Open AF_UNIX socket 5: <unknown>
821==20488== at 0x9EF126A: socketpair (syscall-template.S:81)
822==20488== by 0xF0F20B0: opal_evutil_socketpair (evutil.c:59)
823==20488== by 0xF0F2181: opal_evsignal_init (signal.c:104)
824==20488== by 0xF0F284E: poll_init (poll.c:109)
825==20488== by 0xF0F008F: opal_event_base_new (event.c:366)
826==20488== by 0xF0EFEB2: opal_event_init (event.c:329)
827==20488== by 0xF0E2566: opal_init (opal_init.c:365)
828==20488== by 0xEE8310B: orte_init (orte_init.c:76)
829==20488== by 0xA1F329D: ompi_mpi_init (ompi_mpi_init.c:344)
830==20488== by 0xA22271E: PMPI_Init (pinit.c:80)
831==20488== by 0x6F558FC: PetscInitialize(int*, char***, char const*, char const*) (pinit.c:561)
832==20488== by 0x65AED01: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
833==20488== by 0x65AED36: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
834==20488== by 0x44CA54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
835==20488== by 0x447331: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
836==20488== by 0x449CB5: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
837==20488== by 0x449BA2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
838==20488== by 0x44A14D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
839==20488== by 0x44598D: main (TestNodesOnlyMeshRunner.cpp:19)
840==20488==
841==20488== Open file descriptor 4: /home/garmir/workspace/Chaste/test_summary/TestNodesOnlyMeshRunner
842==20488== <inherited from parent>
843==20488==
844==20488== Open file descriptor 3: /home/garmir/workspace/Chaste/mesh/build/debug_hostconfig,boost=1-65/TestNodesOnlyMesh.log
845==20488== <inherited from parent>
846==20488==
847==20488== Open file descriptor 2:
848==20488== <inherited from parent>
849==20488==
850==20488== Open file descriptor 1:
851==20488== <inherited from parent>
852==20488==
853==20488== Open file descriptor 0: /dev/pts/30
854==20488== <inherited from parent>
855==20488==
856==20488==
857==20488== HEAP SUMMARY:
858==20488== in use at exit: 187,284 bytes in 2,585 blocks
859==20488== total heap usage: 148,808 allocs, 146,225 frees, 26,151,638 bytes allocated
860==20488==
861==20488== LEAK SUMMARY:
862==20488== definitely lost: 0 bytes in 0 blocks
863==20488== indirectly lost: 0 bytes in 0 blocks
864==20488== possibly lost: 0 bytes in 0 blocks
865==20488== still reachable: 120 bytes in 3 blocks
866==20488== suppressed: 187,164 bytes in 2,582 blocks
867==20488== Reachable blocks (those to which a pointer was found) are not shown.
868==20488== To see them, rerun with: --leak-check=full --show-leak-kinds=all
869==20488==
870==20488== For counts of detected and suppressed errors, rerun with: -v
871==20488== ERROR SUMMARY: 41 errors from 38 contexts (suppressed: 51 from 51)
872python python/DisplayTests.py test_summary/lofty.cs.ox.ac.uk.MemoryTesting_hostconfig,boost=1-65 MemoryTesting_hostconfig,boost=1-65
873Test summary generated in file:///home/garmir/workspace/Chaste/test_summary/lofty.cs.ox.ac.uk.MemoryTesting_hostconfig,boost=1-65/index.html
874Overall test status: Failed 1 out of 5 test suites (mesh)
875Test output written to: /home/garmir/testoutput
876scons: done building targets.