Duplicate name of actual target: <pstage/lib>libboost_system.a

[munholl@…]

Hello,

I am trying to compile boost1.53, I can't use a version newer than 1.55 as this is for the Cufflinks RNA tools. I already had this version installed and working previously, but an HDD made me have to reinstall everything. The commands I have used (multiple times) before are:

./bootstrap.sh

which gives:

Building Boost.Build engine with toolset gcc... tools/build/v2/engine/bin.linuxx86_64/b2 Detecting Python version... 2.7 Detecting Python root... /usr Unicode/ICU support for Boost.Regex?... not found. Generating Boost.Build configuration in project-config.jam...

Bootstrapping is done. To build, run:

./b2

To adjust configuration, edit 'project-config.jam'. Further information:

• Command line help: ./b2 --help

• Getting started guide: http://www.boost.org/more/getting_started/unix-variants.html

• Boost.Build documentation: http://www.boost.org/boost-build2/doc/html/index.html

Then I run:

./bjam link=static runtime-link=static stage install I get the following

Which is now giving me:

Performing configuration checks

• 32-bit : no
• 64-bit : yes
• x86 : yes
• has_icu builds : yes

warning: Graph library does not contain MPI-based parallel components. note: to enable them, add "using mpi ;" to your user-config.jam

• iconv (libc) : yes
• icu : yes
• gcc visibility : yes
• long double support : yes

warning: skipping optional Message Passing Interface (MPI) library. note: to enable MPI support, add "using mpi ;" to user-config.jam. note: to suppress this message, pass "--without-mpi" to bjam. note: otherwise, you can safely ignore this message. /genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:1079: in virtual-target.register-actual-name from module virtual-target error: Duplicate name of actual target: <pstage/lib>libboost_system.a error: previous virtual target { common%common.copy-libboost_system.a.STATIC_LIB { gcc%gcc.archive-libboost_system.a.STATIC_LIB { gcc%gcc.compile.c++-error_code.o.OBJ { error_code.cpp.CPP } } } } error: created from ./stage-proper error: another virtual target { common%common.copy-libboost_system.a.STATIC_LIB { gcc%gcc.archive-libboost_system.a.STATIC_LIB { gcc%gcc.compile.c++-error_code.o.OBJ { error_code.cpp.CPP } } } } error: created from ./stage-proper error: added properties: <runtime-link>shared <warnings>on error: removed properties: <runtime-link>static <warnings>all /genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:490: in actualize-no-scanner from module object(file-target)@3722 /genome/Apps/boost_1_53_0/tools/build/v2/build/virtual-target.jam:135: in object(file-target)@3722.actualize from module object(file-target)@3722 /genome/Apps/boost_1_53_0/tools/build/v2/build-system.jam:749: in load from module build-system /genome/Apps/boost_1_53_0/tools/build/v2/kernel/modules.jam:283: in import from module modules /genome/Apps/boost_1_53_0/tools/build/v2/kernel/bootstrap.jam:142: in boost-build from module /genome/Apps/boost_1_53_0/boost-build.jam:17: in module scope from module

Whereas before it compiled without issue. I need the runtime-links to be static, when I try to make the cufflinks files I get a bunch of errors from hpp files in /usr/local/boost/* folders otherwise.

[anonymous]

I got the same errors when I put variant=debug variant=release on the same command line